LegacyElementsReader¶

class LegacyElementsReader(settings: Optional[dict] = None)

Bases: TCossaLabABFReader

Subclass of MetaReader for reading ABF2 files

Public Methods¶

(none)

LegacyElementsReader._get_configs(datafiles: List[str]) → List[dict]¶

Load configuration files as dictionaries, corresponding to datamaps as needed. Default behavior assumes there are no config files needed.

Parameters:

datafiles (List[str]) – List of data file paths.

Returns:

List of configuration dictionaries.

Return type:

List[dict]

Raises:

NotImplementedError – If the file type is not ABF2 specifically
TypeError – If one of the channels does not have an “I” in its header label
ValueError – If any number of channels other than 2 is found in the data file

LegacyElementsReader._get_file_channel_stamps(file_names: List[str], configs: List[dict]) → List[int]¶

Get a list of serialization keys used to sort the list of files associated to the experiment.

Parameters:

Returns:

List of channel numbers parsed from configuration.

Return type:

List[int]

LegacyElementsReader._get_file_pattern(file_name: str) → str¶

Get the base name for matching other files to the same dataset as the initial one provided to the constructor.

LegacyElementsReader._get_file_time_stamps(file_names: List[str], configs: List[dict]) → List[int]¶

Get a list of serialization keys used to sort the list of files associated to the experiment.

Parameters:

Returns:

List of timestamps parsed from configuration.

Return type:

List[int]

Raises:

ValueError – If the filename does not match the expected pattern