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Poriscope 1.9.0 documentation
Poriscope 1.9.0 documentation

User Manuals:

  • User Guide
    • Getting Started
    • User Installation
    • Workflow Overview
    • Tutorial and Documentation
    • Raw Data Tab
    • Event Analysis Tab
    • MetaData Tab
    • Clustering Tab
    • Protein Tab
    • Settings Tab
    • Menus and Session Management
    • Scripting with Poriscope
    • Filtering and Querying
    • Running the Software
    • FAQ
  • Developer Guide
    • Getting Started
    • System Architecture
      • MainView Overview
      • MainModel Overview
      • MainController Overview
      • MainView
      • MainModel
      • MainController
    • Development Workflow
      • Developer Setup and Hook Installation
      • Quality Control and Developer Workflow
      • Post-merge Automation
      • Code Ownership
    • Plugin Development
      • Where to Begin
        • Where to Begin
        • Understanding Base Classes
        • Understanding Signals
      • Frontend Plugin Development
        • Ready to Build Your Own Plugin?
          • MetaView as a Base Class
          • MetaModel as a Base Class
          • MetaController as a Base Class
        • Keeping It Minimal: HelloWorld Tutorial
        • From HelloWorld to a Full MVC Analysis Tab
          • SimpleCalc Full Code Example
        • What’s next ?
          • Adding a Walkthrough to Your Custom MVC Plugin
      • Backend Plugin Development
        • Ready to Build Your Own Data Plugin?
          • Base Data Plugin
          • Build a MetaReader subclass
          • Building a MetaFilter subclass
          • Building a MetaEventFinder subclass
          • Building a MetaWriter subclass
          • Build a MetaEventLoader subclass
          • Build a MetaEventFitter subclass
          • Build a MetaDatabaseWriter subclass
          • Build a MetaDatabaseLoader subclass
          • Thread Safety and Serial Channel Operations

Base Classes:

  • Abstract Base Classes
    • BaseDataPlugin
    • MetaController
    • MetaDatabaseLoader
    • MetaDatabaseWriter
    • MetaEventFinder
    • MetaEventFitter
    • MetaEventLoader
    • MetaFilter
    • MetaModel
    • MetaReader
    • MetaView
    • MetaWriter
    • QtHandler

Plugins:

  • Plugins
    • Analysistabs
      • ProteinView
      • ProteinModel
      • RawDataController
      • MetadataView
      • ClusteringController
      • RawDataModel
      • MetadataController
      • EventAnalysisModel
      • EventAnalysisView
      • ClusteringView
      • RawDataView
      • ClusteringModel
      • EventAnalysisController
      • ProteinController
      • MetadataModel
      • Utils
        • EventAnalysisControls
        • RawDataControls
        • WalkthroughMixin
        • IntroDialog
        • Overlay
        • StepDialog
        • ProteinControls
        • MetadataControls
        • ClusteringControls
    • Datareaders
      • SingleBinaryDecoder
      • ChimeraReader20240101
      • ChimeraReader20240501
      • BinaryReader1X
      • ChimeraReaderVC100
      • TCossaLabABFReader
      • LegacyElementsReader
    • Datawriters
      • SQLiteEventWriter
    • Db Loaders
      • SQLitePeakDBLoader
      • SQLiteDBLoader
    • Dbwriters
      • SQLiteDBWriter
    • Eventfinders
      • BoundedBlockageFinder
      • ThresholdBlockageFinder
      • ClassicBlockageFinder
    • Eventfitters
      • NoFitter
      • ClassicCUSUM
      • _ClassificationWarningCollector
      • PeakFinder
      • P6Flags
      • SingleSublevel
      • HackyList
      • Sublevels
      • NanoTrees
      • IntraCUSUM
      • Basic_PeakFinder
      • CUSUM
    • Eventloaders
      • SQLiteEventLoader
    • Filters
      • BesselFilter
      • WaveletFilter

Signals:

  • Global Signal
    • API Overview
    • Example Usage: RawDataView
  • Data Plugin Controller Signal
    • API Overview
    • Example Usage: editing plugin settings from a view
  • Which to use

Logging Decorators:

  • Logging
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Analysistabs¶

  • ProteinView
  • ProteinModel
  • RawDataController
  • MetadataView
  • ClusteringController
  • RawDataModel
  • MetadataController
  • EventAnalysisModel
  • EventAnalysisView
  • ClusteringView
  • RawDataView
  • ClusteringModel
  • EventAnalysisController
  • ProteinController
  • MetadataModel
  • Utils
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